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Babysitter perseus-statistical-analyzer

Perseus statistical analysis skill for proteomics data analysis and visualization

install
source · Clone the upstream repo
git clone https://github.com/a5c-ai/babysitter
Claude Code · Install into ~/.claude/skills/
T=$(mktemp -d) && git clone --depth=1 https://github.com/a5c-ai/babysitter "$T" && mkdir -p ~/.claude/skills && cp -r "$T/library/specializations/domains/science/bioinformatics/skills/perseus-statistical-analyzer" ~/.claude/skills/a5c-ai-babysitter-perseus-statistical-analyzer && rm -rf "$T"
manifest: library/specializations/domains/science/bioinformatics/skills/perseus-statistical-analyzer/SKILL.md
tags
#proteomics-analysis#statistical-testing#data-visualization#bioinformatics#missing-value-imputation
source content

Perseus Statistical Analyzer Skill

Purpose

Enable Perseus statistical analysis for proteomics data analysis and visualization.

Capabilities

  • Missing value imputation
  • Normalization strategies
  • Statistical testing (t-test, ANOVA)
  • Hierarchical clustering
  • PCA and enrichment analysis
  • Publication-quality plots

Usage Guidelines

  • Impute missing values appropriately
  • Normalize data before statistical analysis
  • Apply appropriate statistical tests
  • Visualize results with clustering and PCA
  • Generate publication-quality figures
  • Document normalization and imputation methods

Dependencies

  • Perseus
  • MSstats
  • limma

Process Integration

  • Mass Spectrometry Proteomics Pipeline (ms-proteomics-pipeline)
  • Multi-Omics Data Integration (multi-omics-integration)