AlterLab-Academic-Skills alterlab-pyzotero
Part of the AlterLab Academic Skills suite. Interact with Zotero reference management libraries using the pyzotero Python client. Retrieve, create, update, and delete items, collections, tags, and attachments via the Zotero Web API v3. Use this skill when working with Zotero libraries programmatically, managing bibliographic references, exporting citations, searching library contents, uploading PDF attachments, or building research automation workflows that integrate with Zotero.
git clone https://github.com/AlterLab-IEU/AlterLab-Academic-Skills
T=$(mktemp -d) && git clone --depth=1 https://github.com/AlterLab-IEU/AlterLab-Academic-Skills "$T" && mkdir -p ~/.claude/skills && cp -r "$T/skills/research-tools/alterlab-pyzotero" ~/.claude/skills/alterlab-ieu-alterlab-academic-skills-alterlab-pyzotero && rm -rf "$T"
skills/research-tools/alterlab-pyzotero/SKILL.mdPyzotero
Pyzotero is a Python wrapper for the Zotero API v3. Use it to programmatically manage Zotero libraries: read items and collections, create and update references, upload attachments, manage tags, and export citations.
Authentication Setup
Required credentials — get from https://www.zotero.org/settings/keys:
- User ID: shown as "Your userID for use in API calls"
- API Key: create at https://www.zotero.org/settings/keys/new
- Library ID: for group libraries, the integer after
in the group URL/groups/
Store credentials in environment variables or a
.env file:
ZOTERO_LIBRARY_ID=your_user_id ZOTERO_API_KEY=your_api_key ZOTERO_LIBRARY_TYPE=user # or "group"
See references/authentication.md for full setup details.
Installation
uv add pyzotero # or with CLI support: uv add "pyzotero[cli]"
Quick Start
from pyzotero import Zotero zot = Zotero(library_id='123456', library_type='user', api_key='ABC1234XYZ') # Retrieve top-level items (returns 100 by default) items = zot.top(limit=10) for item in items: print(item['data']['title'], item['data']['itemType']) # Search by keyword results = zot.items(q='machine learning', limit=20) # Retrieve all items (use everything() for complete results) all_items = zot.everything(zot.items())
Core Concepts
- A
instance is bound to a single library (user or group). All methods operate on that library.Zotero - Item data lives in
. Access fields likeitem['data']
,item['data']['title']
.item['data']['creators'] - Pyzotero returns 100 items by default (API default is 25). Use
to get all items.zot.everything(zot.items()) - Write methods return
on success or raise aTrue
.ZoteroError
Reference Files
| File | Contents |
|---|---|
| references/authentication.md | Credentials, library types, local mode |
| references/read-api.md | Retrieving items, collections, tags, groups |
| references/search-params.md | Filtering, sorting, search parameters |
| references/write-api.md | Creating, updating, deleting items |
| references/collections.md | Collection CRUD operations |
| references/tags.md | Tag retrieval and management |
| references/files-attachments.md | File retrieval and attachment uploads |
| references/exports.md | BibTeX, CSL-JSON, bibliography export |
| references/pagination.md | follow(), everything(), generators |
| references/full-text.md | Full-text content indexing and retrieval |
| references/saved-searches.md | Saved search management |
| references/cli.md | Command-line interface usage |
| references/error-handling.md | Errors and exception handling |
Common Patterns
Fetch and modify an item
item = zot.item('ITEMKEY') item['data']['title'] = 'New Title' zot.update_item(item)
Create an item from a template
template = zot.item_template('journalArticle') template['title'] = 'My Paper' template['creators'][0] = {'creatorType': 'author', 'firstName': 'Jane', 'lastName': 'Doe'} zot.create_items([template])
Export as BibTeX
zot.add_parameters(format='bibtex') bibtex = zot.top(limit=50) # bibtex is a bibtexparser BibDatabase object print(bibtex.entries)
Local mode (read-only, no API key needed)
zot = Zotero(library_id='123456', library_type='user', local=True) items = zot.items()