Awesome-omni-skill deepwiki-mcp

DeepWiki MCP server for AI-powered GitHub repository documentation and Q&A

install

source · Clone the upstream repo

git clone https://github.com/diegosouzapw/awesome-omni-skill

Claude Code · Install into ~/.claude/skills/

T=$(mktemp -d) && git clone --depth=1 https://github.com/diegosouzapw/awesome-omni-skill "$T" && mkdir -p ~/.claude/skills && cp -r "$T/skills/documentation/deepwiki-mcp-plurigrid" ~/.claude/skills/diegosouzapw-awesome-omni-skill-deepwiki-mcp && rm -rf "$T"

manifest: skills/documentation/deepwiki-mcp-plurigrid/SKILL.md

source content

DeepWiki MCP Skill

AI-powered documentation and Q&A for any public GitHub repository

Version: 1.0.0 Trit: 0 (Ergodic - coordinates knowledge retrieval) Bundle: research Provider: Cognition (Devin AI) - Official, Free, No Auth Required

Overview

DeepWiki MCP provides programmatic access to AI-generated documentation for any public GitHub repository indexed on DeepWiki.com. It enables:

Wiki Structure: Get table of contents for any repo's documentation
Wiki Contents: Read AI-generated documentation for specific topics
Ask Questions: Get AI-powered answers grounded in repository context

Server Configuration

Base URL

https://mcp.deepwiki.com/

Wire Protocols

Protocol	URL	Best For
SSE	`https://mcp.deepwiki.com/sse`	Claude, most clients
Streamable HTTP	`https://mcp.deepwiki.com/mcp`	OpenAI, Cloudflare, Amp

Tools

read_wiki_structure

Get the documentation topic tree for a GitHub repository.

{
  "tool": "read_wiki_structure",
  "params": {
    "repo_owner": "AlgebraicJulia",
    "repo_name": "ACSets.jl"
  }
}

Returns: List of documentation topics/sections

read_wiki_contents

Read documentation for a specific topic.

{
  "tool": "read_wiki_contents",
  "params": {
    "repo_owner": "AlgebraicJulia",
    "repo_name": "ACSets.jl",
    "topic": "Overview"
  }
}

Returns: AI-generated documentation content

ask_question

Ask any question about a repository with AI-powered, context-grounded response.

{
  "tool": "ask_question",
  "params": {
    "repo_owner": "AlgebraicJulia",
    "repo_name": "Catlab.jl",
    "question": "How do wiring diagrams compose?"
  }
}

Returns: AI-powered answer with repository context

Client Configuration

Amp / Codex (.mcp.json)

{
  "mcpServers": {
    "deepwiki": {
      "serverUrl": "https://mcp.deepwiki.com/mcp"
    }
  }
}

Claude Desktop

{
  "mcpServers": {
    "deepwiki": {
      "serverUrl": "https://mcp.deepwiki.com/sse"
    }
  }
}

Claude Code (CLI)

claude mcp add -s user -t http deepwiki https://mcp.deepwiki.com/mcp

Cursor / Windsurf

Add to

.cursor/mcp.json

{
  "mcpServers": {
    "deepwiki": {
      "serverUrl": "https://mcp.deepwiki.com/sse"
    }
  }
}

GF(3) Triad Integration

Trit	Skill	Role
-1	hatchery-papers	Validates academic sources
0	deepwiki-mcp	Coordinates repo knowledge
+1	bmorphism-stars	Generates from starred repos

Conservation: (-1) + (0) + (+1) = 0 ✓

Additional Triads

hatchery-papers (-1) ⊗ deepwiki-mcp (0) ⊗ bmorphism-stars (+1) = 0 ✓  [Research]
persistent-homology (-1) ⊗ deepwiki-mcp (0) ⊗ gay-mcp (+1) = 0 ✓  [Documentation]
sheaf-cohomology (-1) ⊗ deepwiki-mcp (0) ⊗ topos-generate (+1) = 0 ✓  [Knowledge]
three-match (-1) ⊗ deepwiki-mcp (0) ⊗ cider-clojure (+1) = 0 ✓  [Clojure Repos]
polyglot-spi (-1) ⊗ deepwiki-mcp (0) ⊗ gay-mcp (+1) = 0 ✓  [Cross-Lang Docs]

Use Cases

1. Understand New Libraries

"Read the documentation structure for react/react and explain the hooks system"

2. Answer Technical Questions

"How does Catlab.jl implement natural transformations?"

3. Compare Implementations

"Compare how ACSets.jl and Catlab.jl handle graph homomorphisms"

4. Explore Category Theory Libraries

"What topics are covered in AlgebraicJulia/AlgebraicDynamics.jl documentation?"

Indexing Your Repository

To make your public GitHub repo available via DeepWiki MCP:

Visit DeepWiki.com
Enter your repository URL
Wait for indexing to complete
Add the DeepWiki badge to your README:

[![Ask DeepWiki](https://deepwiki.com/badge.svg)](https://deepwiki.com/owner/repo)

Related Resources

DeepWiki.com - Web interface
Devin Docs - Official documentation
MCP Specification - Protocol details

ACSet Skill Integration

Both

deepwiki-mcp

and

acsets-algebraic-databases

are ERGODIC (trit 0) — they substitute for each other in triads and coordinate knowledge transport.

Qualified Workflow

Phase	deepwiki-mcp	acsets skill	Verification
Discovery	`read_wiki_structure`	Schema patterns	✓ Catlab.jl has 16 topic pages
Q&A	`ask_question`	Formal definitions	✓ ACSet = Functor C → Set confirmed
Apply	Code examples	Specter navigation	✓ `oapply` documented in Catlab
Debug	"Why does X fail?"	Check naturality	✓ HomSearch uses BacktrackingSearch

Verified DeepWiki ↔ ACSets Correspondence

From DeepWiki

ask_question("AlgebraicJulia/Catlab.jl", "How do ACSets work...")

DeepWiki Response	ACSets Skill	Match
"ACSet represents a functor from schema to Set"	`C-set = Functor X: C → Set`	✓
"ACSetFunctor wraps ACSet for functorial view"	∫G category of elements	✓
"BacktrackingSearch (CSP-based, MRV heuristic)"	`homomorphisms(G, complete_graph(k))`	✓
"VMSearch (compiled virtual machine)"	Specter zero-overhead navigation	✓

Repository Indexing Status (Verified 2025-12-22)

Repository	DeepWiki Status	Topics
`AlgebraicJulia/Catlab.jl`	✅ Indexed	16 pages (GATs, CSets, HomSearch, WiringDiagrams...)
`AlgebraicJulia/ACSets.jl`	❌ Needs indexing	Visit https://deepwiki.com/AlgebraicJulia/ACSets.jl
`AlgebraicJulia/AlgebraicDynamics.jl`	❌ Needs indexing	Visit https://deepwiki.com/AlgebraicJulia/AlgebraicDynamics.jl
`AlgebraicJulia/StructuredDecompositions.jl`	❌ Needs indexing	Visit https://deepwiki.com/AlgebraicJulia/StructuredDecompositions.jl
`redplanetlabs/agent-o-rama`	✅ Indexed	28 pages (Rama PStates, Agent Topologies, Tool Calling...)
`discopy/discopy`	✅ Indexed	23 pages (Monoidal Categories, Quantum Circuits, QNLP...)

Cross-Skill Examples

Example 1: ACSets + Catlab.jl

# 1. Query DeepWiki for oapply semantics
mcp__deepwiki__ask_question("AlgebraicJulia/Catlab.jl", 
  "How does oapply compose undirected wiring diagrams?")

# 2. Apply via ACSets skill patterns
@present SchUWD(FreeSchema) begin
  Box::Ob; Port::Ob; Junction::Ob; OuterPort::Ob
  box::Hom(Port, Box)
  junction::Hom(Port, Junction)
  outer_junction::Hom(OuterPort, Junction)
end

# 3. oapply = colimit of component diagram (verified by DeepWiki)
composite = oapply(wiring_diagram, components)

Example 2: DisCoPy for Quantum/Categorical Diagrams

# Query DisCoPy documentation
mcp__deepwiki__ask_question("discopy/discopy",
  "How do monoidal categories compose with tensor products?")

# DisCoPy has 23 pages covering:
# - Monoidal, Rigid, Symmetric, Frobenius categories
# - Quantum circuits and gates
# - QNLP (Quantum Natural Language Processing)
# - Tensor network backends

Example 3: Agent-o-rama for Rama Integration

;; Query agent-o-rama patterns
mcp__deepwiki__ask_question("redplanetlabs/agent-o-rama",
  "How do PStates store agent invocation state?")

;; 28 pages covering:
;; - Agent Modules and Topology
;; - PStates and Depots storage
;; - Tool Calling Integration
;; - Human-in-the-Loop Workflows

Awesome-omni-skill deepwiki-mcp

DeepWiki MCP Skill

Overview

Server Configuration

Base URL

Wire Protocols

Tools

1.
`read_wiki_structure`

2.
`read_wiki_contents`

3.
`ask_question`

Client Configuration

Amp / Codex (.mcp.json)

Claude Desktop

Claude Code (CLI)

Cursor / Windsurf

GF(3) Triad Integration

Additional Triads

Use Cases

1. Understand New Libraries

2. Answer Technical Questions

3. Compare Implementations

4. Explore Category Theory Libraries

Indexing Your Repository

Related Resources

ACSet Skill Integration

Qualified Workflow

Verified DeepWiki ↔ ACSets Correspondence

Repository Indexing Status (Verified 2025-12-22)

Cross-Skill Examples

See Also

Awesome-omni-skill deepwiki-mcp

DeepWiki MCP Skill

Overview

Server Configuration

Base URL

Wire Protocols

Tools

1. read_wiki_structure

2. read_wiki_contents

3. ask_question

Client Configuration

Amp / Codex (.mcp.json)

Claude Desktop

Claude Code (CLI)

Cursor / Windsurf

GF(3) Triad Integration

Additional Triads

Use Cases

1. Understand New Libraries

2. Answer Technical Questions

3. Compare Implementations

4. Explore Category Theory Libraries

Indexing Your Repository

Related Resources

ACSet Skill Integration

Qualified Workflow

Verified DeepWiki ↔ ACSets Correspondence

Repository Indexing Status (Verified 2025-12-22)

Cross-Skill Examples

See Also

1.
`read_wiki_structure`

2.
`read_wiki_contents`

3.
`ask_question`