Agens biopython
skill_id: biopython
install
source · Clone the upstream repo
git clone https://github.com/Gyoungwe/agens
manifest:
skills/biopython/skill.yamlsource content
skill_id: biopython name: biopython description: Comprehensive molecular biology toolkit. Use for sequence manipulation, file parsing (FASTA/GenBank/PDB), phylogenetics, and programmatic NCBI/PubMed access (Bio.Entrez). Best for batch processing, custom bioinformatics pipelines, BLAST automation. For quick lookups use gget; for multi-service integration use bioservices. version: 1.0.0 author: K-Dense Inc. license: Unknown tags:
- scientific-agent-skills
- biopython tools: [] permissions: network: false filesystem: false shell: false agents:
- bio_code_agent enabled: true source: scientific-agent-skills entrypoint: entry.py readme: README.md input_schema: {} output_schema: type: object metadata: upstream_repo: K-Dense-AI/scientific-agent-skills upstream_skill: biopython upstream_path: scientific-skills/biopython/SKILL.md upstream_frontmatter: name: biopython description: Comprehensive molecular biology toolkit. Use for sequence manipulation, file parsing (FASTA/GenBank/PDB), phylogenetics, and programmatic NCBI/PubMed access (Bio.Entrez). Best for batch processing, custom bioinformatics pipelines, BLAST automation. For quick lookups use gget; for multi-service integration use bioservices. license: Unknown metadata: skill-author: K-Dense Inc.