Claude-skill-registry bmorphism-interactome

GitHub interactome explorer for bmorphism/plurigrid ecosystem. Maps collaborations across AlgebraicJulia, Topos Institute, Anthropic, and MCP servers. Use for discovering cobordisms between research communities.

install
source · Clone the upstream repo
git clone https://github.com/majiayu000/claude-skill-registry
Claude Code · Install into ~/.claude/skills/
T=$(mktemp -d) && git clone --depth=1 https://github.com/majiayu000/claude-skill-registry "$T" && mkdir -p ~/.claude/skills && cp -r "$T/skills/data/bmorphism-interactome" ~/.claude/skills/majiayu000-claude-skill-registry-bmorphism-interactome && rm -rf "$T"
manifest: skills/data/bmorphism-interactome/SKILL.md
source content

bmorphism-interactome Skill

Mapping the cobordisms between research communities via shared contributors

Profile: bmorphism (Barton Rhodes)

@bmorphism | 255 followers | 1.6k following
@plurigrid founder | San Francisco
"Parametrised optics model cybernetic systems"

Core Repositories

RepoStarsDescriptionTrit
Gay.jl3Wide-gamut color sampling + SPI0
agent-o-shiva-Rama agent platform fork0
GeoACSets.jl-Categorical GIS0
bafishka1Fish + Steel Clojure-1
ocaml-mcp-sdk60OCaml MCP SDK-1
babashka-mcp-server16Babashka MCP-1
multiverse-color-game-VisionPro holographic+1

Plurigrid Organization (542 repos)

plurigrid: "building for a more agentic mesoscale 🦆"
├── asi/                    # "everything is topological chemputer!"
├── UnwiringDiagrams.jl     # Worlding/Unworlding Uexküll
├── vcg-auction/            # VCG auctions in Rust
├── microworlds/            # Agent simulations
├── risc0-cosmwasm/         # zkVM + CosmWasm
└── skillz/                 # Anthropic skills fork

Interactome Clusters

Cluster 1: Topos Institute ↔ AlgebraicJulia

Bridge Authors:

  • olynch
    - poly, Catlab.jl, ACSets.jl
  • epatters
    - Catlab lead, Topos
  • kasbah
    - Senior engineer @ Topos

Cobordism:

plurigrid/UnwiringDiagrams.jl ←fork← AlgebraicJulia/WiringDiagrams.jl
           ↓                                    ↓
    "Umwelt Worlding"                   Compositional Systems
           ↓                                    ↓
      Gay.jl SPI ←───────────────────→ ToposInstitute/poly

Cluster 2: Anthropic Engineers

bmorphism follows:

  • klazuka
    (Keith Lazuka)
  • simonster
    (Simon Kornblith)
  • domdomegg
    (adam jones)
  • ericharmeling

Cluster 3: Julia Scientific

  • ViralBShah
    - Julia co-creator, JuliaHub CEO
  • EnzymeAD
    - Automatic differentiation
  • gdalle
    - SparseMatrixColorings.jl
  • andyferris
    - ElaraAI

Cluster 4: Emacs/Clojure

  • fogus
    - Cognitect/Nubank
  • Chouser
    - Clojure core
  • tvraman
    - Emacspeak
  • ept
    (Martin Kleppmann) - DDIA author, CRDTs

Cluster 5: Applied Category Theory

  • jules-hedges
    - Open games, parametrised optics
  • statebox
    - awesome-applied-ct
  • AlgebraicJulia
    - Catlab ecosystem

Commands

# Explore following list
gh api users/bmorphism/following --paginate --jq '.[].login'

# Get repo details
gh api repos/bmorphism/Gay.jl --jq '{stars: .stargazers_count, desc: .description}'

# Find shared contributors
gh api repos/AlgebraicJulia/Catlab.jl/contributors --jq '.[].login' > catlab_contribs.txt
gh api repos/ToposInstitute/poly/contributors --jq '.[].login' > poly_contribs.txt
comm -12 <(sort catlab_contribs.txt) <(sort poly_contribs.txt)

# Plurigrid repos by language
gh api orgs/plurigrid/repos --paginate --jq '.[] | select(.language == "Julia") | .name'

GF(3) Classification

TritRoleRepos
-1 (MINUS)InfrastructureMCP servers, bafishka, CategoricalTowers
0 (ERGODIC)BridgesGay.jl, GeoACSets, agent-o-shiva
+1 (PLUS)Applicationsmultiverse-color-game, gay-hy, xf.jl

Key Insights

  1. Parametrised Optics - bmorphism's bio references jules-hedges' work on cybernetic systems
  2. Topological Chemputer - plurigrid/asi connects Cronin's chemputer to categorical systems
  3. UnwiringDiagrams - Fork of AlgebraicJulia for "Uexküll Umweltung" (environment-world)
  4. MCP Constellation - Multiple MCP servers forming distributed tool network

Related Skills

  • gh-interactome
    - General GitHub network discovery
  • bmorphism-stars
    - 2155 starred repos index
  • gay-julia
    - Gay.jl color integration
  • topos-catcolab
    - CatColab collaboration
  • acsets-algebraic-databases
    - ACSets patterns

Scientific Skill Interleaving

This skill connects to the K-Dense-AI/claude-scientific-skills ecosystem:

Graph Theory

  • networkx [○] via bicomodule

Bibliography References

  • general
    : 734 citations in bib.duckdb

SDF Interleaving

This skill connects to Software Design for Flexibility (Hanson & Sussman, 2021):

Primary Chapter: 10. Adventure Game Example

Concepts: autonomous agent, game, synthesis

GF(3) Balanced Triad

bmorphism-interactome (−) + SDF.Ch10 (+) + [balancer] (○) = 0

Skill Trit: -1 (MINUS - verification)

Secondary Chapters

  • Ch3: Variations on an Arithmetic Theme
  • Ch4: Pattern Matching
  • Ch5: Evaluation
  • Ch6: Layering
  • Ch2: Domain-Specific Languages

Connection Pattern

Adventure games synthesize techniques. This skill integrates multiple patterns.

Cat# Integration

This skill maps to Cat# = Comod(P) as a bicomodule in the equipment structure:

Trit: 0 (ERGODIC)
Home: Prof
Poly Op: ⊗
Kan Role: Adj
Color: #26D826

GF(3) Naturality

The skill participates in triads satisfying:

(-1) + (0) + (+1) ≡ 0 (mod 3)

This ensures compositional coherence in the Cat# equipment structure.