DeepPlan - Persistent File-Based Planning

Auto-routes for complex multi-step tasks requiring persistent memory.

Overview

DeepPlan implements the Manus AI "planning-with-files" pattern that uses filesystem as working memory. This combats:

• Context volatility - plans persist across session resets
• Goal drift - re-reading anchors objectives during long sessions
• Hidden failures - errors logged for pattern avoidance
• Memory fragmentation - findings stored externally, not in context

The 3-File System

task_plan.md

notes.md

[deliverable].md

Location: Created in current working directory.

Workflow Routing

Workflows/DiscoverPlans.md

Workflows/InitializePlan.md

Workflows/UpdateProgress.md

Workflows/ReviewGoals.md

Core Behavior

On Activation

1. Discover existing plans - Scan

   ~/.claude/plans/

   for related project plans
2. Offer options - Resume, Reference, or Start Fresh
3. Initialize files - Create task_plan.md, notes.md in current directory
4. Sync with TodoWrite - Create in-session todos for visibility

During Work

1. Store research findings in

   notes.md

   (keeps context clean)
2. Update

   task_plan.md

   checkboxes as phases complete
3. Keep TodoWrite synced for session visibility
4. Log errors to

   notes.md

   for pattern learning

Before Major Decisions

1. Re-read

   task_plan.md

   - Refresh goals in attention window
2. Verify decision aligns with original objectives
3. Check

   notes.md

   for relevant findings or past errors

Integration with TodoWrite

DeepPlan expands TodoWrite, not replaces it:

Sync behavior:

• Creating a plan phase → Creates matching todo
• Completing a phase → Marks todo complete
• Session restart → Reads files, rebuilds todos

File Formats

task_plan.md

---
project: project-name
directory: /path/to/project
created: 2026-01-07
status: in_progress
---

# Task: [Task Description]

## Phases

### Phase 1: [Name]
- [ ] Step 1
- [ ] Step 2

### Phase 2: [Name]
- [ ] Step 1

## Status Updates

- 2026-01-07 14:30: Started Phase 1

notes.md

# Research Notes

## Findings

### [Topic]
- Finding 1
- Finding 2

## Errors Encountered

### [Error Type]
- What happened
- Resolution

Examples

Example 1: Start a complex task

User: "/atlas:deep-plan Build authentication system with OAuth"
→ Checks ~/.claude/plans/ for existing auth plans
→ Creates task_plan.md with phases
→ Creates notes.md for research
→ Syncs phases to TodoWrite
→ Begins Phase 1

Example 2: Resume after session restart

User: "/atlas:deep-plan Continue the auth work"
→ Discovers task_plan.md in current directory
→ Reads current phase status
→ Rebuilds TodoWrite from checkboxes
→ Reads notes.md for context
→ Continues from last checkpoint

Example 3: Before major decision

[During implementation]
→ About to choose between JWT and session tokens
→ Re-reads task_plan.md to check original requirements
→ Reviews notes.md for relevant research
→ Makes decision aligned with goals